Package: ushr 0.2.3
Sinead E. Morris
ushr: Understanding Suppression of HIV
Analyzes longitudinal data of HIV decline in patients on antiretroviral therapy using the canonical biphasic exponential decay model (pioneered, for example, by work in Perelson et al. (1997) <doi:10.1038/387188a0>; and Wu and Ding (1999) <doi:10.1111/j.0006-341X.1999.00410.x>). Model fitting and parameter estimation are performed, with additional options to calculate the time to viral suppression. Plotting and summary tools are also provided for fast assessment of model results.
Authors:
ushr_0.2.3.tar.gz
ushr_0.2.3.zip(r-4.5)ushr_0.2.3.zip(r-4.4)ushr_0.2.3.zip(r-4.3)
ushr_0.2.3.tgz(r-4.4-any)ushr_0.2.3.tgz(r-4.3-any)
ushr_0.2.3.tar.gz(r-4.5-noble)ushr_0.2.3.tar.gz(r-4.4-noble)
ushr_0.2.3.tgz(r-4.4-emscripten)ushr_0.2.3.tgz(r-4.3-emscripten)
ushr.pdf |ushr.html✨
ushr/json (API)
NEWS
| # Install 'ushr' in R: |
| install.packages('ushr', repos = c('https://sineadmorris.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/sineadmorris/ushr/issues
- actg315raw - Data from ACTG315 trial of HIV viral load in adults undergoing ART
Last updated 5 years agofrom:5f51b056c7. Checks:OK: 7. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Oct 30 2024 |
| R-4.5-win | OK | Oct 30 2024 |
| R-4.5-linux | OK | Oct 30 2024 |
| R-4.4-win | OK | Oct 30 2024 |
| R-4.4-mac | OK | Oct 30 2024 |
| R-4.3-win | OK | Oct 30 2024 |
| R-4.3-mac | OK | Oct 30 2024 |
Exports:biphasic_rootfilter_datafilter_dataTTSget_biphasicget_curveget_nonparametricTTSget_parametricTTSget_singlephaseget_triphasicget_TTSplot_dataplot_modelplot_pairsplot_TTSsimulate_datasingle_rootsummarize_modeltriphasic_rootushrushr_triphasic
Dependencies:clicolorspacecpp11dplyrfansifarvergenericsggplot2gluegtableisobandlabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmepillarpkgconfigpurrrR6RColorBrewerrlangscalesstringistringrtibbletidyrtidyselectutf8vctrsviridisLitewithr
